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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60540897_60541941_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60540897 - 60541941

Intron Length:

1045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACTGCTC

5'SS Class:

weak_major

3'SS Sequence:

TTTCTGCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACCCTTTTAATT

Flanking Amino Acid:

ARLNCVVPPQDGVDRTSTI*

Intron Amino Acid Position:

812

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.8

0.23

1.2

51.7

45.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.4

0.82

0.8

80.9

31.1

Minor 5ss

33.9

-1.8

3.6

41.9

Minor BPS

59.7

0.38

1.2

66.47

39.2

Associated Gene:

Gene:

SAMD4A

Ensembl Gene ID:

ENSAPLG00000005142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026837

60540585 - 60614224

73640

ENSAPLT00000026147

60540585 - 60614224

73640

ENSAPLT00000043538

60540585 - 60614224

73640

ENSAPLT00000034949

60540585 - 60614224

73640