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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60543949_60544358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60543949 - 60544358

Intron Length:

410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTCAT

5'SS Class:

major

3'SS Sequence:

TTTTCCCCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

CACACCTCACGC

Flanking Amino Acid:

SPAILKQGRQNLWFANPGGS

Intron Amino Acid Position:

653

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.2

42.1

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

82.9

0.74

0.7

77.9

23.9

Minor 5ss

30.9

-2.2

3.1

41.2

45.2

Minor BPS

40.8

-0.7

44.03

43.7

Associated Gene:

Gene:

SAMD4A

Ensembl Gene ID:

ENSAPLG00000005142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026837

60540585 - 60614224

73640

ENSAPLT00000026147

60540585 - 60614224

73640

ENSAPLT00000005332

60540585 - 60614224

73640

ENSAPLT00000043538

60540585 - 60614224

73640

ENSAPLT00000034949

60540585 - 60614224

73640