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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60544561_60545958_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60544561 - 60545958

Intron Length:

1398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGCGGG

5'SS Class:

major

3'SS Sequence:

TTTCTCTCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

ACCACCTCACCC

Flanking Amino Acid:

LELSGYRQQRSRGFGQSNSL

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

58.2

46.8

Major BPS

63.6

0.34

65.3

32.1

Major PPT

85.2

0.79

0.7

24.1

Minor 5ss

34.7

-1.7

3.5

46.9

48.5

Minor BPS

46.8

-0.2

1.9

53.51

44.1

Associated Gene:

Gene:

SAMD4A

Ensembl Gene ID:

ENSAPLG00000005142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026147

60540585 - 60614224

73640

ENSAPLT00000005332

60540585 - 60614224

73640

ENSAPLT00000043538

60540585 - 60614224

73640

ENSAPLT00000034949

60540585 - 60614224

73640

ENSAPLT00000026837

60540585 - 60614224

73640