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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60548147_60549725_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60548147 - 60549725

Intron Length:

1579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTGAATCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

CTCTCTTGAATC

Flanking Amino Acid:

RQNLLKSLERDILEGGNLRV

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

Major BPS

69.5

0.48

73.5

28.6

Major PPT

69.5

0.44

0.9

62.4

38.5

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

61.9

0.35

1.4

66.43

40.1

Associated Gene:

Gene:

SAMD4A

Ensembl Gene ID:

ENSAPLG00000005142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005332

60540585 - 60614224

73640

ENSAPLT00000043538

60540585 - 60614224

73640

ENSAPLT00000034949

60540585 - 60614224

73640

ENSAPLT00000026147

60540585 - 60614224

73640