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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60554820_60559298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60554820 - 60559298

Intron Length:

4479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGATTTTTATTT

Flanking Amino Acid:

DCQVVAGCSSVLSGQTHHSP

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

37.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.6

0.98

0.6

92.5

25.6

Minor 5ss

37.3

-1.4

3.1

48.8

47.4

Minor BPS

58.8

0.35

1.5

72.71

38.8

Associated Gene:

Gene:

SAMD4A

Ensembl Gene ID:

ENSAPLG00000005142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026837

60540585 - 60614224

73640

ENSAPLT00000026147

60540585 - 60614224

73640

ENSAPLT00000005332

60540585 - 60614224

73640