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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60567790_60613973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60567790 - 60613973

Intron Length:

46184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTAATT

Flanking Amino Acid:

HILEGEANNPGIINQWQQES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

71.8

39.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.9

0.56

0.9

70.3

34.4

Minor 5ss

31.9

-2.1

2.9

43.6

43.3

Minor BPS

76.9

0.92

1.4

92.73

28.9

Associated Gene:

Gene:

SAMD4A

Ensembl Gene ID:

ENSAPLG00000005142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026837

60540585 - 60614224

73640

ENSAPLT00000026147

60540585 - 60614224

73640

ENSAPLT00000005332

60540585 - 60614224

73640

ENSAPLT00000043538

60540585 - 60614224

73640

ENSAPLT00000034949

60540585 - 60614224

73640