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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60627590_60628952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60627590 - 60628952

Intron Length:

1363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCGC

5'SS Class:

strong_major

3'SS Sequence:

ATGTGTATTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

ATTCTGCTAATT

Flanking Amino Acid:

LAQGQYHDLKQLFMSANSTA

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

67.1

44.6

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

70.7

0.47

67.5

Minor 5ss

38.2

-1.3

3.1

45.6

Minor BPS

47.2

-0.1

2.3

72.09

Associated Gene:

Gene:

CGRRF1

Ensembl Gene ID:

ENSAPLG00000005044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005213

60627239 - 60634297

7059