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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60646742_60647896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60646742 - 60647896

Intron Length:

1155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

TTCCCTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAG

U12 Branch Point Sequence:

CCCTTATCAGTC

Flanking Amino Acid:

MSESLVVCDVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

56.6

42.5

Major BPS

64.3

0.36

1.6

41.2

Major PPT

0.77

0.7

80.3

Minor 5ss

23.3

-3.1

3.2

25.4

39.4

Minor BPS

40.2

-0.7

1.8

42.51

39.2

Associated Gene:

Gene:

GMFB

Ensembl Gene ID:

ENSAPLG00000023672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032469

60646657 - 60656946

10290

ENSAPLT00000005189

60646657 - 60663234

16578