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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60647994_60648532_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60647994 - 60648532

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGATTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTGTTTTGATT

Flanking Amino Acid:

RKETNNAAIIMKIDKDKQLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

86.9

22.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.9

0.74

0.8

78.1

35.3

Minor 5ss

45.5

-0.5

2.8

58.5

40.4

Minor BPS

66.4

0.6

1.3

81.5

34.7

Associated Gene:

Gene:

GMFB

Ensembl Gene ID:

ENSAPLG00000023672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005189

60646657 - 60663234

16578

ENSAPLT00000032469

60646657 - 60656946

10290