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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60648583_60649531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60648583 - 60649531

Intron Length:

949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTTAA

5'SS Class:

major

3'SS Sequence:

TTAACGTTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TTTTGTTTAACG

Flanking Amino Acid:

QLVVLDEEHEGISPDELKDE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

32.1

Major BPS

77.3

0.68

81.5

Major PPT

67.2

0.39

1.1

59.1

45.8

Minor 5ss

-0.9

2.5

49.8

46.5

Minor BPS

0.55

1.8

78.9

38.1

Associated Gene:

Gene:

GMFB

Ensembl Gene ID:

ENSAPLG00000023672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032469

60646657 - 60656946

10290

ENSAPLT00000005189

60646657 - 60663234

16578