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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60649582_60650652_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

60649582 - 60650652

Intron Length:

1071

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

TCG|ATATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

CCTCAGAAAAAAC|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

GTTTCTTTAACC

Flanking Amino Acid:

LKDELPERQPRFIVYSYKYQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

34.3

-0.9

3.4

43.6

Major BPS

74.7

0.61

65.9

40.9

Major PPT

29.5

-1.1

34.4

32.3

Minor 5ss

92.2

1.4

0.9

88.8

23.7

Minor BPS

85.6

1.1

0.9

87.16

29.3

Associated Gene:

Gene:

GMFB

Ensembl Gene ID:

ENSAPLG00000023672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032469

60646657 - 60656946

10290

ENSAPLT00000005189

60646657 - 60663234

16578