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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60669800_60670732_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60669800 - 60670732

Intron Length:

933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATTG

5'SS Class:

strong_major

3'SS Sequence:

GTGTCGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

AATTAGCAAACT

Flanking Amino Acid:

NMPLLAYHIWRYMSRPVMSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.4

36.8

Major BPS

77.9

0.69

0.8

75.9

Major PPT

72.5

0.51

44.4

Minor 5ss

41.6

-0.9

3.1

56.3

47.9

Minor BPS

41.1

-0.6

2.5

65.48

44.4

Associated Gene:

Gene:

CNIH1

Ensembl Gene ID:

ENSAPLG00000004994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005146

60666489 - 60672009

5521