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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60772577_60776180_F

Intron Information:

Intron Rank:

124327

Intron Class:

major

Intron Phase:

Intron Coordinates:

60772577 - 60776180

Intron Length:

3604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

AGTGCATTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

80.9

0.69

0.9

73.5

41.9

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

49.2

-0

63.83

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037959

60754923 - 60776201

21279