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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60838415_60839376_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60838415 - 60839376

Intron Length:

962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CGCTCCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

TTTTTTTGTACC

Flanking Amino Acid:

ANTVRSFHHEEHLETVPGPS

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.4

32.7

Major BPS

61.6

0.29

1.4

63.4

Major PPT

72.2

0.5

0.8

61.9

34.9

Minor 5ss

29.8

-2.3

3.1

40.6

45.6

Minor BPS

57.9

0.23

1.8

74.62

Associated Gene:

Gene:

BMP4

Ensembl Gene ID:

ENSAPLG00000028313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023493

60837452 - 60840693

3242

ENSAPLT00000022960

60837452 - 60840462

3011