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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6091693_6100661_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6091693 - 6100661

Intron Length:

8969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CTAATTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TTCTCTCTAATT

Flanking Amino Acid:

MSGDGGAGEQAAEYVPEKVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

82.2

0.8

0.9

81.6

Major PPT

0.61

0.9

69.5

41.3

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

68.1

0.65

1.6

84.17

37.2

Associated Gene:

Gene:

CSTF3

Ensembl Gene ID:

ENSAPLG00000007217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048458

6091621 - 6140480

48860

ENSAPLT00000045199

6091621 - 6140480

48860

ENSAPLT00000007566

6091621 - 6140600

48980