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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6100764_6100892_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6100764 - 6100892

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTAGTGA

5'SS Class:

weak_major

3'SS Sequence:

TTTCAATTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TGATTTTCAATT

Flanking Amino Acid:

AWSILIREAQNQPIDKARKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.2

53.8

39.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

80.5

0.69

0.8

78.2

34.8

Minor 5ss

37.9

-1.4

3.1

47.9

47.7

Minor BPS

59.7

0.38

1.5

73.3

37.9

Associated Gene:

Gene:

CSTF3

Ensembl Gene ID:

ENSAPLG00000007217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045199

6091621 - 6140480

48860

ENSAPLT00000007566

6091621 - 6140600

48980