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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6100989_6124026_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6100989 - 6124026

Intron Length:

23038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAATATT

5'SS Class:

major

3'SS Sequence:

TGCTTCCCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAA

U12 Branch Point Sequence:

AATAGTTTAAGT

Flanking Amino Acid:

RFWKLYIEAEIKAKNYDKVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

85.4

31.1

Major BPS

60.6

0.26

1.1

67.5

35.1

Major PPT

75.8

0.58

0.8

70.4

30.7

Minor 5ss

37.4

-1.4

2.9

51.9

44.6

Minor BPS

48.8

-0

67.99

42.9

Associated Gene:

Gene:

CSTF3

Ensembl Gene ID:

ENSAPLG00000007217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045199

6091621 - 6140480

48860

ENSAPLT00000007566

6091621 - 6140600

48980