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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61069828_61071665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

61069828 - 61071665

Intron Length:

1838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TGTAACTGATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

89.4

0.89

0.7

84.3

30.8

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

48.9

-0

1.9

72.13

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003177

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003245

61057739 - 61104742

47004