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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61071814_61082394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

61071814 - 61082394

Intron Length:

10581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTCCT

5'SS Class:

major

3'SS Sequence:

CTTTTTTTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

TTAACAGGAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

73.5

Major BPS

77.1

0.67

77.9

32.2

Major PPT

74.9

0.56

1.1

82.6

32.8

Minor 5ss

33.8

-1.8

47.3

41.1

Minor BPS

43.3

-0.5

2.2

59.42

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003177

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003245

61057739 - 61104742

47004