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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61082750_61094531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

61082750 - 61094531

Intron Length:

11782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTAAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TATTGTTAAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

77.8

0.69

78.2

31.8

Major PPT

67.7

0.4

63.5

40.9

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

58.5

0.34

2.1

80.6

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003177

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003245

61057739 - 61104742

47004