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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61122260_61123064_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61122260 - 61123064

Intron Length:

805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCTC

5'SS Class:

major

3'SS Sequence:

GCTGGCGGCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CGGTGCTGAGCG

Flanking Amino Acid:

TARAEGGDAQEAVAMALDGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

61.3

43.5

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

53.6

0.08

1.1

45.6

41.4

Minor 5ss

33.6

-1.9

3.7

50.1

46.4

Minor BPS

42.5

-0.7

2.1

44.77

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041851

61122194 - 61124692

2499