Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_61154907_61155097_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61154907 - 61155097

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGAGT

5'SS Class:

major

3'SS Sequence:

TCGCTGTGCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TGGTGTTTCACA

Flanking Amino Acid:

YYSFFDLNPKYDAIRINQLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

66.9

44.1

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

65.6

0.35

60.4

40.3

Minor 5ss

32.3

-2

3.5

48.9

46.9

Minor BPS

48.6

-0.1

2.2

63.28

43.5

Associated Gene:

Gene:

FERMT2

Ensembl Gene ID:

ENSAPLG00000002657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002740

61153887 - 61165593

11707