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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61164195_61165419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61164195 - 61165419

Intron Length:

1225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TGCCCCCAAAAT

Flanking Amino Acid:

QWNVNWEIKMVTVEFADDVR

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

62.5

42.3

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

66.1

0.36

0.8

57.7

33.3

Minor 5ss

-2.3

3.3

35.2

43.3

Minor BPS

45.6

-0.2

2.1

64.49

45.1

Associated Gene:

Gene:

FERMT2

Ensembl Gene ID:

ENSAPLG00000002657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002740

61153887 - 61165593

11707