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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61186876_61187422_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61186876 - 61187422

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

CAGTTAATACCA

Flanking Amino Acid:

EFIDGSLQSGGKVLVHGNAG

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

73.8

30.8

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

82.3

0.73

0.8

81.1

30.9

Minor 5ss

37.6

-1.4

3.1

48.6

47.1

Minor BPS

41.7

-0.6

49.92

Associated Gene:

Gene:

STYX

Ensembl Gene ID:

ENSAPLG00000002535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002560

61184474 - 61191651

7178

ENSAPLT00000028643

61182326 - 61191651

9326