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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61187460_61188753_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61187460 - 61188753

Intron Length:

1294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AGTCTTGTAATT

Flanking Amino Acid:

VENIIRFFPMTKEFIDGSLQ

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

88.7

25.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

89.5

0.89

0.6

20.1

Minor 5ss

36.4

-1.5

48.3

41.8

Minor BPS

48.8

-0

1.9

67.71

37.6

Associated Gene:

Gene:

STYX

Ensembl Gene ID:

ENSAPLG00000002535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028643

61182326 - 61191651

9326

ENSAPLT00000002560

61184474 - 61191651

7178