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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61202834_61203938_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61202834 - 61203938

Intron Length:

1105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCTCT

5'SS Class:

weak_major

3'SS Sequence:

TTATTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTGCTGTTAAAT

Flanking Amino Acid:

ADLRNVCTEAGMFAIRADHD

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

66.9

39.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

89.4

0.89

0.7

84.9

29.5

Minor 5ss

59.3

0.31

2.3

74.9

41.1

Minor BPS

51.3

0.12

2.1

74.17

42.5

Associated Gene:

Gene:

PSMC6

Ensembl Gene ID:

ENSAPLG00000002349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002440

61202331 - 61215022

12692