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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61204011_61205923_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61204011 - 61205923

Intron Length:

1913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTGAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTATTTCTAATT

Flanking Amino Acid:

AGPITKHGEIDYEAIVKLSD

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

87.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

65.6

0.35

1.1

62.2

43.3

Minor 5ss

35.1

-1.7

2.7

42.8

Minor BPS

63.4

0.5

1.6

80.83

Associated Gene:

Gene:

PSMC6

Ensembl Gene ID:

ENSAPLG00000002349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002440

61202331 - 61215022

12692