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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61207929_61208392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61207929 - 61208392

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

TACTAGTTAAAC

Flanking Amino Acid:

PKGCLLYGPPGTGKTLLARA

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.2

28.9

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

77.8

0.63

0.9

72.8

37.5

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

47.7

-0.2

2.3

61.88

42.9

Associated Gene:

Gene:

PSMC6

Ensembl Gene ID:

ENSAPLG00000002349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002440

61202331 - 61215022

12692