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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61238369_61243374_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61238369 - 61243374

Intron Length:

5006

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCA|GCAAACGTC

5'SS Class:

weak_major

3'SS Sequence:

CATTGCACTGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

TCATTGTTCACA

Flanking Amino Acid:

CMCKLGKMSSHTPPIRSSWQ

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.2

0.05

1.4

64.8

41.2

Major BPS

74.2

0.6

0.9

75.7

Major PPT

59.6

0.22

1.1

57.9

37.2

Minor 5ss

32.1

-2

4.5

54.7

Minor BPS

47.3

-0.2

2.4

63.03

43.6

Associated Gene:

Gene:

GPR137C

Ensembl Gene ID:

ENSAPLG00000001064

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020551

61238336 - 61253910

15575