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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6124527_6125963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6124527 - 6125963

Intron Length:

1437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAG

U12 Branch Point Sequence:

AGTTGCTCTATG

Flanking Amino Acid:

RETKGKLPSYKEKMAQAYDF

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

45.6

-0.2

1.5

53.6

38.7

Major PPT

88.4

0.86

0.6

88.2

21.6

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

43.3

-0.6

2.2

50.62

43.4

Associated Gene:

Gene:

CSTF3

Ensembl Gene ID:

ENSAPLG00000007217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045199

6091621 - 6140480

48860

ENSAPLT00000007566

6091621 - 6140600

48980

ENSAPLT00000048458

6091621 - 6140480

48860