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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6128850_6129053_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6128850 - 6129053

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAACT

5'SS Class:

major

3'SS Sequence:

GTTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

GTGTTCAAAACA

Flanking Amino Acid:

DYMNARRVAKEYETVMKGLD

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

71.6

38.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

83.5

0.75

0.9

80.8

36.8

Minor 5ss

34.4

-1.8

3.3

50.3

45.7

Minor BPS

49.5

-0

1.9

64.47

41.9

Associated Gene:

Gene:

CSTF3

Ensembl Gene ID:

ENSAPLG00000007217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048458

6091621 - 6140480

48860

ENSAPLT00000045199

6091621 - 6140480

48860

ENSAPLT00000007566

6091621 - 6140600

48980