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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6129217_6129745_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6129217 - 6129745

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATCAGA

5'SS Class:

major

3'SS Sequence:

TTTTTCCTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TATTTCTTACGT

Flanking Amino Acid:

TEDQTLITKRVMFAYEQCLL

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.8

41.1

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

84.1

0.77

0.7

77.9

30.9

Minor 5ss

38.8

-1.3

2.8

49.6

46.2

Minor BPS

61.1

0.43

1.9

80.35

41.7

Associated Gene:

Gene:

CSTF3

Ensembl Gene ID:

ENSAPLG00000007217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048458

6091621 - 6140480

48860

ENSAPLT00000045199

6091621 - 6140480

48860

ENSAPLT00000007566

6091621 - 6140600

48980