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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6129856_6130298_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6129856 - 6130298

Intron Length:

443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

CATTTTGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

CATTTTGTAACA

Flanking Amino Acid:

QSSKLLAEKGDMNNAKLFSD

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

73.8

0.54

69.3

40.3

Minor 5ss

31.2

-2.2

3.1

31.3

42.6

Minor BPS

54.5

0.14

67.28

39.8

Associated Gene:

Gene:

CSTF3

Ensembl Gene ID:

ENSAPLG00000007217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048458

6091621 - 6140480

48860

ENSAPLT00000007566

6091621 - 6140600

48980