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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6129856_6131504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6129856 - 6131504

Intron Length:

1649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTACTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTTTCTTTACTT

Flanking Amino Acid:

QSSKLLAEKGSRMKYEKVHS

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

0.6

65.6

41.1

Major PPT

0.74

0.7

82.4

27.9

Minor 5ss

31.2

-2.2

3.1

31.3

42.6

Minor BPS

75.9

0.89

1.5

91.31

32.6

Associated Gene:

Gene:

CSTF3

Ensembl Gene ID:

ENSAPLG00000007217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045199

6091621 - 6140480

48860