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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61329733_61331509_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61329733 - 61331509

Intron Length:

1777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

CCCTGGTGATGT

Flanking Amino Acid:

LAPGAQPSAQLNTFQAAIAY

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.1

37.5

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

72.1

0.5

0.9

68.7

31.7

Minor 5ss

25.6

-2.8

3.1

31.9

42.9

Minor BPS

31.5

-1.3

2.4

43.24

Associated Gene:

Gene:

NID2

Ensembl Gene ID:

ENSAPLG00000026347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017609

61301360 - 61339390

38031

ENSAPLT00000032934

61301360 - 61339430

38071