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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61335182_61335651_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61335182 - 61335651

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCACCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

GTTTCACCACCA

Flanking Amino Acid:

GSTPPRCRNPAGSSQQLTPC

Intron Amino Acid Position:

902

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

34.7

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

69.2

0.43

60.8

40.4

Minor 5ss

31.2

-2.2

3.2

38.8

46.5

Minor BPS

43.5

-0.4

2.3

62.86

42.6

Associated Gene:

Gene:

NID2

Ensembl Gene ID:

ENSAPLG00000026347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017609

61301360 - 61339390

38031

ENSAPLT00000032934

61301360 - 61339430

38071