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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61336608_61337129_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61336608 - 61337129

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAAGTCC

5'SS Class:

major

3'SS Sequence:

CCGACCCCATCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TCCCCTCCGACC

Flanking Amino Acid:

EEAKTLLSLHGSIVVGIDYD

Intron Amino Acid Position:

1113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.1

62.8

36.4

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

59.2

0.21

0.9

55.5

34.9

Minor 5ss

39.8

-1.1

3.4

55.3

42.5

Minor BPS

43.8

-0.5

1.8

51.99

39.6

Associated Gene:

Gene:

NID2

Ensembl Gene ID:

ENSAPLG00000026347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032934

61301360 - 61339430

38071

ENSAPLT00000017609

61301360 - 61339390

38031