Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_61337260_61337403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61337260 - 61337403

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCACAC

U12 Branch Point Sequence:

GGAGCCACACGT

Flanking Amino Acid:

GAEPETVISSGLLSPEGLAV

Intron Amino Acid Position:

1156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

67.5

37.7

Major BPS

-0.3

1.1

48.6

36.6

Major PPT

74.2

0.55

0.7

68.7

Minor 5ss

36.1

-1.6

2.8

44.9

43.1

Minor BPS

35.7

-1

2.1

47.66

44.1

Associated Gene:

Gene:

NID2

Ensembl Gene ID:

ENSAPLG00000026347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032934

61301360 - 61339430

38071

ENSAPLT00000017609

61301360 - 61339390

38031