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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61338274_61338476_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61338274 - 61338476

Intron Length:

203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAACTTTG

5'SS Class:

major

3'SS Sequence:

GACCCGTGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

CTTTTGTGACCC

Flanking Amino Acid:

FSKLLCWADAGTKNLECTFP

Intron Amino Acid Position:

1266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.2

69.7

43.7

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

46.5

-0.2

1.1

40.6

Minor 5ss

48.9

-0.1

2.5

58.5

46.1

Minor BPS

45.2

-0.3

2.3

62.1

43.7

Associated Gene:

Gene:

NID2

Ensembl Gene ID:

ENSAPLG00000026347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032934

61301360 - 61339430

38071

ENSAPLT00000017609

61301360 - 61339390

38031