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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61338601_61339218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61338601 - 61339218

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTCTCTGCCACC

Flanking Amino Acid:

ADHFYHTDWRRDGVIAVNKE

Intron Amino Acid Position:

1307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.3

32.8

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

70.7

0.47

0.9

38.4

Minor 5ss

33.3

-1.9

2.9

41.3

44.8

Minor BPS

43.6

-0.5

2.5

61.68

44.3

Associated Gene:

Gene:

NID2

Ensembl Gene ID:

ENSAPLG00000026347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017609

61301360 - 61339390

38031

ENSAPLT00000032934

61301360 - 61339430

38071