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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61348819_61349788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61348819 - 61349788

Intron Length:

970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGATGA

5'SS Class:

major

3'SS Sequence:

CTCAATTTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TGCTTCTCAATT

Flanking Amino Acid:

LAVRLEYGDNADKYKDSTPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

65.1

37.3

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

70.3

0.46

39.7

Minor 5ss

32.3

-2

39.1

46.1

Minor BPS

0.52

1.5

76.39

40.7

Associated Gene:

Gene:

RTRAF

Ensembl Gene ID:

ENSAPLG00000016032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016739

61340549 - 61352972

12424

ENSAPLT00000027067

61340549 - 61352972

12424