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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61374095_61374195_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
61374095 - 61374195

Intron Length:
101

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGAGAGAC

5'SS Class:
major

3'SS Sequence:
TTGCCCCGAGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATAAAT

U12 Branch Point Sequence:
GTCCCCATAAAT

Flanking Amino Acid:
DRLEEDSQDEEIEMLVDDPR

Intron Amino Acid Position:
215

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77
0.64
1
65.6
34.4

Major BPS
62.2
0.3
1.1
68.9
33

Major PPT
63.5
0.31
1
59.3
36.8

Minor 5ss
24.8
-2.9
3.1
24.3
37.2

Minor BPS
55.5
0.25
1.8
73.07
42.8

Associated Gene:

Gene:
FRMD6

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

61372909 - 61385520
12612