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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6138439_6138804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6138439 - 6138804

Intron Length:

366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

TTTCTTCCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

CTGTCTTGCACT

Flanking Amino Acid:

MIPFQPRHLAPPGLHPVPGG

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.3

74.1

38.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

85.2

0.79

0.7

80.5

Minor 5ss

34.9

-1.7

2.9

40.4

38.9

Minor BPS

51.9

0.14

72.1

45.2

Associated Gene:

Gene:

CSTF3

Ensembl Gene ID:

ENSAPLG00000007217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048458

6091621 - 6140480

48860

ENSAPLT00000045199

6091621 - 6140480

48860

ENSAPLT00000007566

6091621 - 6140600

48980