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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61429193_61429894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61429193 - 61429894

Intron Length:

702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

CTTCTCTGAATA

Flanking Amino Acid:

IAKVDVTEQPGLSGRFVITA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

51.3

46.9

Major BPS

69.1

0.48

32.1

Major PPT

91.4

0.93

0.6

87.9

22.3

Minor 5ss

23.3

-3.1

3.2

43.6

Minor BPS

61.2

0.35

1.4

69.18

37.3

Associated Gene:

Gene:

TMX1

Ensembl Gene ID:

ENSAPLG00000025218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044141

61429143 - 61430244

1102