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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6144535_6144738_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6144535 - 6144738

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCAATTTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

CAAACCAAAACC

Flanking Amino Acid:

NPDNTICKLIDSRIQKFLEN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

77.3

0.62

0.9

68.5

41.8

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

45.9

-0.3

54.39

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017408

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025075

6143299 - 6148979

5681