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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61463280_61463717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61463280 - 61463717

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGCGT

5'SS Class:

major

3'SS Sequence:

TCTGAACCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TTGCTCTGAACC

Flanking Amino Acid:

QLRNMVQQIQENSVEFEACL

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.3

55.2

Major BPS

69.8

0.49

37.5

Major PPT

65.9

0.36

0.9

55.3

40.1

Minor 5ss

36.6

-1.5

3.7

56.3

47.9

Minor BPS

64.9

0.45

1.4

72.55

38.2

Associated Gene:

Gene:

TRIM9

Ensembl Gene ID:

ENSAPLG00000016305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031985

61451672 - 61477616

25945

ENSAPLT00000017009

61451873 - 61476724

24852

ENSAPLT00000045198

61451873 - 61479330

27458