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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61468835_61469987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61468835 - 61469987

Intron Length:

1153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

GCTTGCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGGGCGCTGACG

Flanking Amino Acid:

LDDGNGGQFREVYVGKETMC

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

70.4

38.6

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

69.8

0.45

1.1

41.2

Minor 5ss

33.5

-1.9

3.5

41.3

45.2

Minor BPS

41.1

-0.8

2.4

47.78

45.6

Associated Gene:

Gene:

TRIM9

Ensembl Gene ID:

ENSAPLG00000016305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045198

61451873 - 61479330

27458

ENSAPLT00000031985

61451672 - 61477616

25945

ENSAPLT00000017009

61451873 - 61476724

24852