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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61470127_61472156_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61470127 - 61472156

Intron Length:

2030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCGC

5'SS Class:

major

3'SS Sequence:

ATCTCACGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGCATTGATC

Flanking Amino Acid:

SKTLVLQTSEETQPEEQTLP

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

58.8

42.8

Major BPS

0.62

1.4

85.7

34.9

Major PPT

66.1

0.36

63.3

37.9

Minor 5ss

30.7

-2.2

3.2

33.6

41.9

Minor BPS

61.6

0.35

1.7

74.7

36.3

Associated Gene:

Gene:

TRIM9

Ensembl Gene ID:

ENSAPLG00000016305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045198

61451873 - 61479330

27458

ENSAPLT00000031985

61451672 - 61477616

25945