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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61470127_61474887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61470127 - 61474887

Intron Length:

4761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCGC

5'SS Class:

major

3'SS Sequence:

TCATCTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTGCCTTTCATC

Flanking Amino Acid:

SKTLVLQTSEVAWFSFDPSS

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

58.8

42.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.7

0.71

0.8

73.3

36.9

Minor 5ss

30.7

-2.2

3.2

33.6

41.9

Minor BPS

49.7

-0

1.7

58.79

41.2

Associated Gene:

Gene:

TRIM9

Ensembl Gene ID:

ENSAPLG00000016305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017009

61451873 - 61476724

24852