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Intron Name: Anas_platyrhynchos_platyrhynchos_5_61472346_61473508_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61472346 - 61473508

Intron Length:

1163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCCGG

5'SS Class:

major

3'SS Sequence:

TATCTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

GATGTGTGAAAT

Flanking Amino Acid:

HSSLQSLNSAGCNFETQGTP

Intron Amino Acid Position:

595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

50.9

47.3

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

82.1

0.72

0.7

77.6

30.7

Minor 5ss

32.3

-2

39.4

45.9

Minor BPS

42.7

-0.4

2.2

59.74

43.2

Associated Gene:

Gene:

TRIM9

Ensembl Gene ID:

ENSAPLG00000016305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045198

61451873 - 61479330

27458

ENSAPLT00000031985

61451672 - 61477616

25945